International Journal Open Access

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

Authors

Cole Trapnell, Adam Roberts, Loyal A. Goff, Geo M. Pertea, Daehwan Kim, David R. Kelley, Harold Pimentel, Steven L. Salzberg, John L. Rinn, Lior S. Pachter

Journal

Nature Protocols

Year Published

2012

Publisher

Nature Portfolio

Citations

12126 citations

Type

Article

Language

EN

Topics & Concepts

RNA-Seq (0.68) Computational biology (0.62) Biology (0.54) Computer science (0.46) Gene (0.45)

Abstract

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks - Full text available via OpenAlex

Author Details

Cole Trapnell

ORCID

Adam Roberts

ORCID

Loyal A. Goff

ORCID

Geo M. Pertea

ORCID

Daehwan Kim

ORCID

David R. Kelley

ORCID

Harold Pimentel

ORCID

Steven L. Salzberg

ORCID

John L. Rinn

ORCID

Lior S. Pachter

ORCID

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